Thermal expansion properties of Fe-based nanocrystalline Fe13.5Cu1Nb3Si13.5B9 and Fe91Zr7B2 alloys are studied, and are compared with that of the amorphous alloys with the same composition. The experimental results indicated that, below Curie temperature, the thermal expansion coefficients of the nanocrystalline alloys are much greater than that of the amorphous alloys, and above Curie temperature, the thermal expansion coefficients of the nanocrystalline alloys exceed that of the amorphous alloys a little. We believe that the difference of the thermal expansion between Fe-based nanocrystalline and amorphous alloys is related to the Invar effect.